HL_7OSM_090

3D structure

PDB id

7OSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUUCG

Length

6 nucleotides

Bulged bases

7OSM|1|25S|U|2571

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7OSM_090 not in the Motif Atlas

Homologous match to HL_8C3A_054

Geometric discrepancy: 0.3217

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7OSM|1|25S|C|2568
7OSM|1|25S|A|2569
7OSM|1|25S|U|2570
7OSM|1|25S|U|2571
7OSM|1|25S|C|2572
7OSM|1|25S|G|2573

Current chains

Chain 25S

25S rRNA

Nearby chains

Chain eL27

60S ribosomal protein L27