HL_7OSM_111
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CACAUUG
- Length
- 7 nucleotides
- Bulged bases
- 7OSM|1|58S|A|111, 7OSM|1|58S|U|113
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OSM_111 not in the Motif Atlas
- Homologous match to HL_5TBW_075
- Geometric discrepancy: 0.1729
- The information below is about HL_5TBW_075
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22523.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
7OSM|1|58S|C|108
7OSM|1|58S|A|109
7OSM|1|58S|C|110
7OSM|1|58S|A|111
7OSM|1|58S|U|112
7OSM|1|58S|U|113
7OSM|1|58S|G|114
Current chains
- Chain 58S
- 5.8S rRNA
Nearby chains
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain eL37
- Ribosomal protein L37
- Chain eL39
- 60S ribosomal protein L39
- Chain uL23
- 60S ribosomal protein L25
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