HL_7OSM_128
3D structure
- PDB id
- 7OSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligands
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GGAUUGAA(YG)AUCC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: YG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25222.2
- Basepair signature
- cWW-cWW-F-F-cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
7OSM|1|ASIT|G|29
7OSM|1|ASIT|G|30
7OSM|1|ASIT|A|31
7OSM|1|ASIT|U|32
7OSM|1|ASIT|U|33
7OSM|1|ASIT|G|34
7OSM|1|ASIT|A|35
7OSM|1|ASIT|A|36
7OSM|1|ASIT|YG|37
7OSM|1|ASIT|A|38
7OSM|1|ASIT|U|39
7OSM|1|ASIT|C|40
7OSM|1|ASIT|C|41
Current chains
- Chain ASIT
- PHE tRNA
Nearby chains
- Chain 18S
- Small subunit ribosomal RNA; SSU rRNA
- Chain 25S
- Large subunit ribosomal RNA; LSU rRNA
- Chain PSIT
- Transfer RNA; tRNA
- Chain eEF2
- Elongation factor 2
- Chain mRNA
- MRNA
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