HL_7OW7_046
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- G(PSU)UUAAUUAAAAC
- Length
- 13 nucleotides
- Bulged bases
- 7OW7|1|A|A|3642, 7OW7|1|A|A|3643, 7OW7|1|A|U|3644, 7OW7|1|A|A|3648
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7OW7_046 not in the Motif Atlas
- Geometric match to HL_7A0S_045
- Geometric discrepancy: 0.3043
- The information below is about HL_7A0S_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7OW7|1|A|G|3638
7OW7|1|A|PSU|3639
7OW7|1|A|U|3640
7OW7|1|A|U|3641
7OW7|1|A|A|3642
7OW7|1|A|A|3643
7OW7|1|A|U|3644
7OW7|1|A|U|3645
7OW7|1|A|A|3646
7OW7|1|A|A|3647
7OW7|1|A|A|3648
7OW7|1|A|A|3649
7OW7|1|A|C|3650
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain d
- 60S ribosomal protein L37
Coloring options: