HL_7P2E_011
3D structure
- PDB id
- 7P2E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GA(5MU)UAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7P2E|1|A|U|1081
- QA status
- Modified nucleotides: 5MU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P2E_011 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.0717
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
7P2E|1|A|G|1074
7P2E|1|A|A|1075
7P2E|1|A|5MU|1076
7P2E|1|A|U|1077
7P2E|1|A|A|1078
7P2E|1|A|G|1079
7P2E|1|A|A|1080
7P2E|1|A|U|1081
7P2E|1|A|A|1082
7P2E|1|A|C|1083
7P2E|1|A|C|1084
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 8
- Translation initiation factor IF-3, mitochondrial
- Chain I
- 28S ribosomal protein S11, mitochondrial
Coloring options: