HL_7P7Q_012

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

ACACGAGAAAU

Length

11 nucleotides

Bulged bases

7P7Q|1|A|G|425

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7Q_012 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.123

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7P7Q|1|A|A|421
7P7Q|1|A|C|422
7P7Q|1|A|A|423
7P7Q|1|A|C|424
7P7Q|1|A|G|425
7P7Q|1|A|A|426
7P7Q|1|A|G|427
7P7Q|1|A|A|428
7P7Q|1|A|A|429
7P7Q|1|A|A|430
7P7Q|1|A|U|431

Current chains

Chain A

23S rRNA

Nearby chains

Chain Z

50S ribosomal protein L28