HL_7P7Q_048
3D structure
- PDB id
- 7P7Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- CGUAACUAUAA(OMC)G
- Length
- 13 nucleotides
- Bulged bases
- 7P7Q|1|A|A|1926
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7P7Q_048 not in the Motif Atlas
- Geometric match to HL_8P9A_160
- Geometric discrepancy: 0.2585
- The information below is about HL_8P9A_160
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70658.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
7P7Q|1|A|C|1922
7P7Q|1|A|G|1923
7P7Q|1|A|U|1924
7P7Q|1|A|A|1925
7P7Q|1|A|A|1926
7P7Q|1|A|C|1927
7P7Q|1|A|U|1928
7P7Q|1|A|A|1929
7P7Q|1|A|U|1930
7P7Q|1|A|A|1931
7P7Q|1|A|A|1932
7P7Q|1|A|OMC|1933
7P7Q|1|A|G|1934
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain D
- Transfer RNA; tRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain b
- mRNA
Coloring options: