HL_7P7R_018

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAGAG

Length

7 nucleotides

Bulged bases

7P7R|1|A|A|651

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_018 not in the Motif Atlas

Geometric match to HL_5J7L_148

Geometric discrepancy: 0.1986

The information below is about HL_5J7L_148

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

7P7R|1|A|C|648
7P7R|1|A|G|649
7P7R|1|A|A|650
7P7R|1|A|A|651
7P7R|1|A|G|652
7P7R|1|A|A|653
7P7R|1|A|G|654

Current chains

Chain A

23S rRNA

Nearby chains

Chain I

50S ribosomal protein L4