HL_7P7R_043

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACUUCGGU

Length

8 nucleotides

Bulged bases

7P7R|1|A|U|1756

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_043 not in the Motif Atlas

Geometric match to HL_6CF2_001

Geometric discrepancy: 0.2712

The information below is about HL_6CF2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46211.1

Basepair signature

cWW-cWW-tSW-F

Number of instances in this motif group

10

Unit IDs

7P7R|1|A|A|1753
7P7R|1|A|C|1754
7P7R|1|A|U|1755
7P7R|1|A|U|1756
7P7R|1|A|C|1757
7P7R|1|A|G|1758
7P7R|1|A|G|1759
7P7R|1|A|U|1760

Current chains

Chain A

23S rRNA

Nearby chains

Chain a

Small subunit ribosomal RNA; SSU rRNA