HL_7P7R_054

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

7P7R|1|A|A|2281, 7P7R|1|A|C|2288

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_054 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0763

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7P7R|1|A|C|2277
7P7R|1|A|U|2278
7P7R|1|A|A|2279
7P7R|1|A|A|2280
7P7R|1|A|A|2281
7P7R|1|A|A|2282
7P7R|1|A|G|2283
7P7R|1|A|G|2284
7P7R|1|A|U|2285
7P7R|1|A|A|2286
7P7R|1|A|A|2287
7P7R|1|A|C|2288
7P7R|1|A|G|2289

Current chains

Chain A

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L16

Chain Y

50S ribosomal protein L27