HL_7P7R_055

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUUGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7R_055 not in the Motif Atlas

Homologous match to HL_5J7L_188

Geometric discrepancy: 0.2105

The information below is about HL_5J7L_188

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.4

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

7P7R|1|A|G|2316
7P7R|1|A|G|2317
7P7R|1|A|U|2318
7P7R|1|A|U|2319
7P7R|1|A|G|2320
7P7R|1|A|G|2321
7P7R|1|A|A|2322
7P7R|1|A|A|2323
7P7R|1|A|A|2324
7P7R|1|A|U|2325
7P7R|1|A|C|2326

Current chains

Chain A

23S rRNA

Nearby chains

Chain J

50S ribosomal protein L5