HL_7P7U_006

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

7P7U|1|A|A|198

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7U_006 not in the Motif Atlas

Geometric match to HL_4WF9_006

Geometric discrepancy: 0.1058

The information below is about HL_4WF9_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

24

Unit IDs

7P7U|1|A|G|196
7P7U|1|A|A|197
7P7U|1|A|A|198
7P7U|1|A|A|199
7P7U|1|A|C|200
7P7U|1|A|A|201
7P7U|1|A|U|202
7P7U|1|A|C|203

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L15

Chain Z

50S ribosomal protein L28