HL_7P7U_021

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUAAAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7P7U_021 not in the Motif Atlas

Homologous match to HL_7RQB_022

Geometric discrepancy: 0.1057

The information below is about HL_7RQB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84085.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

15

Unit IDs

7P7U|1|A|G|751
7P7U|1|A|G|752
7P7U|1|A|U|753
7P7U|1|A|A|754
7P7U|1|A|A|755
7P7U|1|A|A|756
7P7U|1|A|A|757
7P7U|1|A|C|758

Current chains

Chain A

23S rRNA

Nearby chains

Chain G

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain p

30S ribosomal protein S15