HL_7PHC_060

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

CUGAAGCAGG

Length

10 nucleotides

Bulged bases

7PHC|1|3|G|2537

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PHC_060 not in the Motif Atlas

Geometric match to HL_2Y9H_005

Geometric discrepancy: 0.3196

The information below is about HL_2Y9H_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_44506.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

5

Unit IDs

7PHC|1|3|C|2535
7PHC|1|3|U|2536
7PHC|1|3|G|2537
7PHC|1|3|A|2538
7PHC|1|3|A|2539
7PHC|1|3|G|2540
7PHC|1|3|C|2541
7PHC|1|3|A|2542
7PHC|1|3|G|2543
7PHC|1|3|G|2544

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L36

Chain e

50S ribosomal protein L6