HL_7PHC_065

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

CUGAAAGCAUCUAAG

Length

15 nucleotides

Bulged bases

7PHC|1|3|G|2759, 7PHC|1|3|C|2763

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PHC_065 not in the Motif Atlas

Geometric match to HL_5J7L_199

Geometric discrepancy: 0.238

The information below is about HL_5J7L_199

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74055.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

7

Unit IDs

7PHC|1|3|C|2753
7PHC|1|3|U|2754
7PHC|1|3|G|2755
7PHC|1|3|A|2756
7PHC|1|3|A|2757
7PHC|1|3|A|2758
7PHC|1|3|G|2759
7PHC|1|3|C|2760
7PHC|1|3|A|2761
7PHC|1|3|U|2762
7PHC|1|3|C|2763
7PHC|1|3|U|2764
7PHC|1|3|A|2765
7PHC|1|3|A|2766
7PHC|1|3|G|2767

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L36

Chain e

50S ribosomal protein L6