HL_7PHC_086
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 7PHC|1|5|U|790
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PHC_086 not in the Motif Atlas
- Homologous match to HL_4LFB_017
- Geometric discrepancy: 0.3593
- The information below is about HL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 14
Unit IDs
7PHC|1|5|G|783
7PHC|1|5|A|784
7PHC|1|5|U|785
7PHC|1|5|U|786
7PHC|1|5|A|787
7PHC|1|5|G|788
7PHC|1|5|A|789
7PHC|1|5|U|790
7PHC|1|5|A|791
7PHC|1|5|C|792
7PHC|1|5|C|793
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain 3
- Large subunit ribosomal RNA; LSU rRNA
- Chain 8
- Transfer RNA; tRNA
- Chain J
- 30S ribosomal protein S11
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