HL_7PIA_035

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

7PIA|1|3|A|1420, 7PIA|1|3|U|1424, 7PIA|1|3|U|1425

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PIA_035 not in the Motif Atlas

Homologous match to HL_7A0S_035

Geometric discrepancy: 0.5674

The information below is about HL_7A0S_035

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

7PIA|1|3|G|1417
7PIA|1|3|U|1418
7PIA|1|3|U|1419
7PIA|1|3|A|1420
7PIA|1|3|A|1421
7PIA|1|3|U|1422
7PIA|1|3|A|1423
7PIA|1|3|U|1424
7PIA|1|3|U|1425
7PIA|1|3|C|1426

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain s

50S ribosomal protein L23