HL_7PIA_054
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- CUAAAAGGUAACG
- Length
- 13 nucleotides
- Bulged bases
- 7PIA|1|3|A|2276, 7PIA|1|3|C|2283
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIA_054 not in the Motif Atlas
- Homologous match to HL_8VTW_053
- Geometric discrepancy: 0.4534
- The information below is about HL_8VTW_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
7PIA|1|3|C|2272
7PIA|1|3|U|2273
7PIA|1|3|A|2274
7PIA|1|3|A|2275
7PIA|1|3|A|2276
7PIA|1|3|A|2277
7PIA|1|3|G|2278
7PIA|1|3|G|2279
7PIA|1|3|U|2280
7PIA|1|3|A|2281
7PIA|1|3|A|2282
7PIA|1|3|C|2283
7PIA|1|3|G|2284
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 5S ribosomal RNA; 5S rRNA
- Chain l
- 50S ribosomal protein L16
- Chain u
- 50S ribosomal protein L27
Coloring options: