HL_7PIA_070
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- UUUGAUCCUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIA_070 not in the Motif Atlas
- Homologous match to HL_4LFB_001
- Geometric discrepancy: 0.4057
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_73535.1
- Basepair signature
- cWW-tHW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
7PIA|1|5|U|13
7PIA|1|5|U|14
7PIA|1|5|U|15
7PIA|1|5|G|16
7PIA|1|5|A|17
7PIA|1|5|U|18
7PIA|1|5|C|19
7PIA|1|5|C|20
7PIA|1|5|U|21
7PIA|1|5|G|22
7PIA|1|5|G|23
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain D
- 30S ribosomal protein S5
- Chain K
- 30S ribosomal protein S12
Coloring options: