HL_7PIA_072

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UUGAAAGA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PIA_072 not in the Motif Atlas

Geometric match to HL_5TBW_012

Geometric discrepancy: 0.3529

The information below is about HL_5TBW_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

7PIA|1|5|U|143
7PIA|1|5|U|144
7PIA|1|5|G|145
7PIA|1|5|A|146
7PIA|1|5|A|147
7PIA|1|5|A|148
7PIA|1|5|G|149
7PIA|1|5|A|150

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain o

50S ribosomal protein L19