HL_7PIB_001
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGUUAACCUG
- Length
- 10 nucleotides
- Bulged bases
- 7PIB|1|3|U|63
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_001 not in the Motif Atlas
- Geometric match to HL_6JXM_002
- Geometric discrepancy: 0.3098
- The information below is about HL_6JXM_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_97725.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
7PIB|1|3|U|61
7PIB|1|3|G|62
7PIB|1|3|U|63
7PIB|1|3|U|64
7PIB|1|3|A|65
7PIB|1|3|A|66
7PIB|1|3|C|67
7PIB|1|3|C|68
7PIB|1|3|U|69
7PIB|1|3|G|70
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain s
- 50S ribosomal protein L23
- Chain w
- 50S ribosomal protein L29
Coloring options: