HL_7PIB_103
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UCUGAAGAA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIB_103 not in the Motif Atlas
- Geometric match to HL_7RQB_022
- Geometric discrepancy: 0.2387
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7PIB|1|7|U|32
7PIB|1|7|C|33
7PIB|1|7|U|34
7PIB|1|7|G|35
7PIB|1|7|A|36
7PIB|1|7|A|37
7PIB|1|7|G|38
7PIB|1|7|A|39
7PIB|1|7|A|40
Current chains
- Chain 7
- tRNA-Phe
Nearby chains
- Chain 3
- Large subunit ribosomal RNA; LSU rRNA
- Chain 5
- Small subunit ribosomal RNA; SSU rRNA
- Chain 8
- Transfer RNA; tRNA
- Chain 9
- Elongation factor G
- Chain L
- 30S ribosomal protein S13
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