HL_7PIR_022
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CGUUGAAACG
- Length
- 10 nucleotides
- Bulged bases
- 7PIR|1|3|U|782, 7PIR|1|3|A|786, 7PIR|1|3|C|787
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PIR_022 not in the Motif Atlas
- Geometric match to HL_4WF9_023
- Geometric discrepancy: 0.3845
- The information below is about HL_4WF9_023
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
7PIR|1|3|C|779
7PIR|1|3|G|780
7PIR|1|3|U|781
7PIR|1|3|U|782
7PIR|1|3|G|783
7PIR|1|3|A|784
7PIR|1|3|A|785
7PIR|1|3|A|786
7PIR|1|3|C|787
7PIR|1|3|G|788
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain b
- 50S ribosomal protein L3
- Chain m
- 50S ribosomal protein L17
- Chain r
- 50S ribosomal protein L22
- Chain y
- 50S ribosomal protein L32
Coloring options: