HL_7PIR_024

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

UUUAAG

Length

6 nucleotides

Bulged bases

7PIR|1|3|U|862, 7PIR|1|3|A|865

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PIR_024 not in the Motif Atlas

Homologous match to HL_8VTW_024

Geometric discrepancy: 0.4704

The information below is about HL_8VTW_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.2

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

7PIR|1|3|U|861
7PIR|1|3|U|862
7PIR|1|3|U|863
7PIR|1|3|A|864
7PIR|1|3|A|865
7PIR|1|3|G|866

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain k

50S ribosomal protein L15