HL_7PJZ_045

3D structure

PDB id

7PJZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PJZ_045 not in the Motif Atlas

Geometric match to HL_4QLM_001

Geometric discrepancy: 0.2366

The information below is about HL_4QLM_001

Detailed Annotation

GNRA

Broad Annotation

GNRA

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

7PJZ|1|A|C|1868
7PJZ|1|A|G|1869
7PJZ|1|A|C|1870
7PJZ|1|A|A|1871
7PJZ|1|A|A|1872
7PJZ|1|A|G|1873

Current chains

Chain A

23S ribosomal RNA

Nearby chains