HL_7PO0_013

3D structure

PDB id

7PO0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CCACAG

Length

6 nucleotides

Bulged bases

7PO0|1|A|C|1151, 7PO0|1|A|A|1154

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PO0_013 not in the Motif Atlas

Geometric match to HL_6TQA_003

Geometric discrepancy: 0.2186

The information below is about HL_6TQA_003

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_56334.1

Basepair signature

cWW-F

Number of instances in this motif group

16

Unit IDs

7PO0|1|A|C|1150
7PO0|1|A|C|1151
7PO0|1|A|A|1152
7PO0|1|A|C|1153
7PO0|1|A|A|1154
7PO0|1|A|G|1155

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 3

Aurora kinase A-interacting protein

Chain L

28S ribosomal protein S15, mitochondrial