HL_7PO3_003

3D structure

PDB id

7PO3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome small subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

CACCACG

Length

7 nucleotides

Bulged bases

7PO3|1|A|C|739

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PO3_003 not in the Motif Atlas

Geometric match to HL_5TBW_004

Geometric discrepancy: 0.2534

The information below is about HL_5TBW_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_86929.1

Basepair signature

cWW-F

Number of instances in this motif group

9

Unit IDs

7PO3|1|A|C|734
7PO3|1|A|A|735
7PO3|1|A|C|736
7PO3|1|A|C|737
7PO3|1|A|A|738
7PO3|1|A|C|739
7PO3|1|A|G|740

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 0

28S ribosomal protein S34, mitochondrial

Chain M

28S ribosomal protein S16, mitochondrial

Chain U

28S ribosomal protein S26, mitochondrial