HL_7PO3_011

3D structure

PDB id

7PO3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome small subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

GA(5MU)UAGAUACC

Length

11 nucleotides

Bulged bases

7PO3|1|A|U|1081

QA status

Modified nucleotides: 5MU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PO3_011 not in the Motif Atlas

Homologous match to HL_5J7L_017

Geometric discrepancy: 0.0797

The information below is about HL_5J7L_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7PO3|1|A|G|1074
7PO3|1|A|A|1075
7PO3|1|A|5MU|1076
7PO3|1|A|U|1077
7PO3|1|A|A|1078
7PO3|1|A|G|1079
7PO3|1|A|A|1080
7PO3|1|A|U|1081
7PO3|1|A|A|1082
7PO3|1|A|C|1083
7PO3|1|A|C|1084

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain F

28S ribosomal protein S7, mitochondrial

Chain I

28S ribosomal protein S11, mitochondrial