HL_7PO4_002
3D structure
- PDB id
- 7PO4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Assembly intermediate of human mitochondrial ribosome large subunit (largely unfolded rRNA with MALSU1, L0R8F8 and ACP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- AGGCGAU
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PO4_002 not in the Motif Atlas
- Geometric match to HL_7A0S_008
- Geometric discrepancy: 0.101
- The information below is about HL_7A0S_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_76371.1
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
7PO4|1|A|A|1746
7PO4|1|A|G|1747
7PO4|1|A|G|1748
7PO4|1|A|C|1749
7PO4|1|A|G|1750
7PO4|1|A|A|1751
7PO4|1|A|U|1752
Current chains
- Chain A
- 16SrRNA
Nearby chains
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain H
- 39S ribosomal protein L9, mitochondrial
- Chain M
- 39S ribosomal protein L15, mitochondrial
- Chain X
- 39S ribosomal protein L28, mitochondrial
- Chain i
- 39S ribosomal protein L51, mitochondrial
Coloring options: