HL_7PWO_008
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CUUGAGCGUG
- Length
- 10 nucleotides
- Bulged bases
- 7PWO|1|1|G|236, 7PWO|1|1|C|237
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWO_008 not in the Motif Atlas
- Homologous match to HL_8P9A_120
- Geometric discrepancy: 0.2431
- The information below is about HL_8P9A_120
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.3
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
7PWO|1|1|C|231
7PWO|1|1|U|232
7PWO|1|1|U|233
7PWO|1|1|G|234
7PWO|1|1|A|235
7PWO|1|1|G|236
7PWO|1|1|C|237
7PWO|1|1|G|238
7PWO|1|1|U|239
7PWO|1|1|G|240
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain L2
- 60S ribosomal protein L13
- Chain N2
- Ribosomal protein L15
- Chain a2
- Ribosomal protein L27a
- Chain o2
- Ribosomal protein L44
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