HL_7PWO_014

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GCC

Length

3 nucleotides

Bulged bases

7PWO|1|1|C|437

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7PWO_014 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.3359

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

7PWO|1|1|G|433
7PWO|1|1|C|437
7PWO|1|1|C|438

Current chains

Chain 1

rRNA 28S

Nearby chains

Chain C2

Ribosomal protein L4

Chain L2

60S ribosomal protein L13

Chain N2

Ribosomal protein L15