HL_7PWO_097
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CCCGCCCG
- Length
- 8 nucleotides
- Bulged bases
- 7PWO|1|42|C|76
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7PWO_097 not in the Motif Atlas
- Geometric match to HL_5TBW_006
- Geometric discrepancy: 0.1977
- The information below is about HL_5TBW_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_71121.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 24
Unit IDs
7PWO|1|42|C|74
7PWO|1|42|C|75
7PWO|1|42|C|76
7PWO|1|42|G|77
7PWO|1|42|C|78
7PWO|1|42|C|79
7PWO|1|42|C|80
7PWO|1|42|G|81
Current chains
- Chain 42
- rRNA 5.8S
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y2
- Ribosomal protein L26
- Chain h2
- Ribosomal protein L35
- Chain l2
- Ribosomal protein L39
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