HL_7Q08_013

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GCUUCUGC

Length

8 nucleotides

Bulged bases

7Q08|1|1|C|543, 7Q08|1|1|G|545

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_013 not in the Motif Atlas

Homologous match to HL_8C3A_012

Geometric discrepancy: 0.2358

The information below is about HL_8C3A_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

7Q08|1|1|G|539
7Q08|1|1|C|540
7Q08|1|1|U|541
7Q08|1|1|U|542
7Q08|1|1|C|543
7Q08|1|1|U|544
7Q08|1|1|G|545
7Q08|1|1|C|546

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain 0

60S ribosomal protein L20

Chain q

Ribosomal 60S subunit protein L9B

Chain u

Ribosomal 60S subunit protein L14B