HL_7Q08_029

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GUGUAACAAC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_029 not in the Motif Atlas

Geometric match to HL_3SKL_006

Geometric discrepancy: 0.3933

The information below is about HL_3SKL_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

7Q08|1|1|G|1262
7Q08|1|1|U|1263
7Q08|1|1|G|1264
7Q08|1|1|U|1265
7Q08|1|1|A|1266
7Q08|1|1|A|1267
7Q08|1|1|C|1268
7Q08|1|1|A|1269
7Q08|1|1|A|1270
7Q08|1|1|C|1271

Current chains

Chain 1

25S ribosomal RNA

Nearby chains