HL_7Q08_039

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GUUUAUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_039 not in the Motif Atlas

Homologous match to HL_8C3A_038

Geometric discrepancy: 0.1619

The information below is about HL_8C3A_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75033.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

3

Unit IDs

7Q08|1|1|G|1715
7Q08|1|1|U|1716
7Q08|1|1|U|1717
7Q08|1|1|U|1718
7Q08|1|1|A|1719
7Q08|1|1|U|1720
7Q08|1|1|C|1721

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain AQ

Ribosomal 60S subunit protein L43A

Chain z

Ribosomal protein L19