HL_7Q08_071

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CGGAAAGG

Length

8 nucleotides

Bulged bases

7Q08|1|1|A|3208, 7Q08|1|1|A|3209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_071 not in the Motif Atlas

Homologous match to HL_8C3A_070

Geometric discrepancy: 0.0901

The information below is about HL_8C3A_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_24596.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

7

Unit IDs

7Q08|1|1|C|3205
7Q08|1|1|G|3206
7Q08|1|1|G|3207
7Q08|1|1|A|3208
7Q08|1|1|A|3209
7Q08|1|1|A|3210
7Q08|1|1|G|3211
7Q08|1|1|G|3212

Current chains

Chain 1

25S ribosomal RNA

Nearby chains

Chain k

Ribosomal 60S subunit protein L3

Chain w

Ribosomal 60S subunit protein L16A