HL_7Q08_076
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- UGAAUUGCAGAUAUUCGUGAA
- Length
- 21 nucleotides
- Bulged bases
- 7Q08|1|4|U|80, 7Q08|1|4|C|84, 7Q08|1|4|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Q08_076 not in the Motif Atlas
- Homologous match to HL_8C3A_230
- Geometric discrepancy: 0.095
- The information below is about HL_8C3A_230
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_08513.2
- Basepair signature
- cWW-tSH-tSS-tHS-F-F-F-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
7Q08|1|4|U|69
7Q08|1|4|G|70
7Q08|1|4|A|71
7Q08|1|4|A|72
7Q08|1|4|U|73
7Q08|1|4|U|74
7Q08|1|4|G|75
7Q08|1|4|C|76
7Q08|1|4|A|77
7Q08|1|4|G|78
7Q08|1|4|A|79
7Q08|1|4|U|80
7Q08|1|4|A|81
7Q08|1|4|U|82
7Q08|1|4|U|83
7Q08|1|4|C|84
7Q08|1|4|G|85
7Q08|1|4|U|86
7Q08|1|4|G|87
7Q08|1|4|A|88
7Q08|1|4|A|89
Current chains
- Chain 4
- 5.8S ribosomal RNA
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
- Chain 9
- Ribosomal 60S subunit protein L26B
- Chain AI
- Ribosomal 60S subunit protein L35A
- Chain AK
- Ribosomal protein L37
- Chain AM
- 60S ribosomal protein L39
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