HL_7Q08_081

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

GUAAUUC

Length

7 nucleotides

Bulged bases

7Q08|1|A|U|156, 7Q08|1|A|U|157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_081 not in the Motif Atlas

Geometric match to HL_4V88_188

Geometric discrepancy: 0.2429

The information below is about HL_4V88_188

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

7Q08|1|A|G|152
7Q08|1|A|U|153
7Q08|1|A|A|154
7Q08|1|A|A|155
7Q08|1|A|U|156
7Q08|1|A|U|157
7Q08|1|A|C|158

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain H

40S ribosomal protein S6

Chain Z

40S ribosomal protein S24