HL_7Q08_089

3D structure

PDB id

7Q08 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with cycloheximide

Experimental method

ELECTRON MICROSCOPY

Resolution

2.56 Å

Loop

Sequence

CGACACG

Length

7 nucleotides

Bulged bases

7Q08|1|A|A|450, 7Q08|1|A|A|452, 7Q08|1|A|C|453

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q08_089 not in the Motif Atlas

Geometric match to HL_5TBW_006

Geometric discrepancy: 0.168

The information below is about HL_5TBW_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

7Q08|1|A|C|448
7Q08|1|A|G|449
7Q08|1|A|A|450
7Q08|1|A|C|451
7Q08|1|A|A|452
7Q08|1|A|C|453
7Q08|1|A|G|454

Current chains

Chain A

18S ribosomal RNA

Nearby chains

Chain F

40S ribosomal protein S4

Chain Z

40S ribosomal protein S24