HL_7Q0F_113

3D structure

PDB id

7Q0F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Candida albicans 80S ribosome in complex with phyllanthoside

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

GUUUAGGGAAC

Length

11 nucleotides

Bulged bases

7Q0F|1|A|U|1673

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7Q0F_113 not in the Motif Atlas

Geometric match to HL_8VTW_008

Geometric discrepancy: 0.3998

The information below is about HL_8VTW_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

7Q0F|1|A|G|1672
7Q0F|1|A|U|1673
7Q0F|1|A|U|1674
7Q0F|1|A|U|1675
7Q0F|1|A|A|1676
7Q0F|1|A|G|1677
7Q0F|1|A|G|1699
7Q0F|1|A|G|1700
7Q0F|1|A|A|1701
7Q0F|1|A|A|1702
7Q0F|1|A|C|1703

Current chains

Chain A

18S ribosomal RNA

Nearby chains