HL_7Q0P_105
3D structure
- PDB id
- 7Q0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with anisomycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- AUUGAGAGCU
- Length
- 10 nucleotides
- Bulged bases
- 7Q0P|1|A|G|1228, 7Q0P|1|A|G|1230
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Q0P_105 not in the Motif Atlas
- Geometric match to HL_4V88_213
- Geometric discrepancy: 0.2269
- The information below is about HL_4V88_213
- Detailed Annotation
- Anticodon loop related
- Broad Annotation
- Anticodon loop related
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
7Q0P|1|A|A|1223
7Q0P|1|A|U|1224
7Q0P|1|A|U|1225
7Q0P|1|A|G|1226
7Q0P|1|A|A|1227
7Q0P|1|A|G|1228
7Q0P|1|A|A|1229
7Q0P|1|A|G|1230
7Q0P|1|A|C|1231
7Q0P|1|A|U|1232
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain Q
- Ribosomal 40S subunit protein S15
- Chain e
- Ribosomal 40S subunit protein S29A
- Chain g
- Ubiquitin-ribosomal 40S subunit protein S31 fusion protein
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