HL_7Q0R_047
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- UCUAAUUAAAA
- Length
- 11 nucleotides
- Bulged bases
- 7Q0R|1|1|A|2116, 7Q0R|1|1|A|2117, 7Q0R|1|1|U|2118, 7Q0R|1|1|A|2122
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Q0R_047 not in the Motif Atlas
- Homologous match to HL_8C3A_046
- Geometric discrepancy: 0.0549
- The information below is about HL_8C3A_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.6
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
7Q0R|1|1|U|2113
7Q0R|1|1|C|2114
7Q0R|1|1|U|2115
7Q0R|1|1|A|2116
7Q0R|1|1|A|2117
7Q0R|1|1|U|2118
7Q0R|1|1|U|2119
7Q0R|1|1|A|2120
7Q0R|1|1|A|2121
7Q0R|1|1|A|2122
7Q0R|1|1|A|2123
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain AK
- Ribosomal protein L37
- Chain j
- Ribosomal 60S subunit protein L2A
Coloring options: