HL_7Q0R_050
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 7Q0R|1|1|A|2234
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Q0R_050 not in the Motif Atlas
- Homologous match to HL_8C3A_049
- Geometric discrepancy: 0.0883
- The information below is about HL_8C3A_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
7Q0R|1|1|G|2231
7Q0R|1|1|U|2232
7Q0R|1|1|A|2233
7Q0R|1|1|A|2234
7Q0R|1|1|C|2235
7Q0R|1|1|U|2236
7Q0R|1|1|A|2237
7Q0R|1|1|U|2238
7Q0R|1|1|G|2239
7Q0R|1|1|A|2240
7Q0R|1|1|C|2241
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: