HL_7Q0R_057
3D structure
- PDB id
- 7Q0R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Candida albicans 80S ribosome in complex with blasticidin s
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.67 Å
Loop
- Sequence
- UUAAACGAUAACG
- Length
- 13 nucleotides
- Bulged bases
- 7Q0R|1|1|A|2609, 7Q0R|1|1|C|2616
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7Q0R_057 not in the Motif Atlas
- Homologous match to HL_8C3A_056
- Geometric discrepancy: 0.0781
- The information below is about HL_8C3A_056
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19870.9
- Basepair signature
- cWW-tHH-cWW-tHS-F-F-tWW
- Number of instances in this motif group
- 8
Unit IDs
7Q0R|1|1|U|2605
7Q0R|1|1|U|2606
7Q0R|1|1|A|2607
7Q0R|1|1|A|2608
7Q0R|1|1|A|2609
7Q0R|1|1|C|2610
7Q0R|1|1|G|2611
7Q0R|1|1|A|2612
7Q0R|1|1|U|2613
7Q0R|1|1|A|2614
7Q0R|1|1|A|2615
7Q0R|1|1|C|2616
7Q0R|1|1|G|2617
Current chains
- Chain 1
- 25S ribosomal RNA
Nearby chains
- Chain 2
- Ribosomal 60S subunit protein L21A
- Chain AC
- 60S ribosomal protein L29
- Chain r
- Ribosomal 60S subunit protein L10
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