HL_7QCA_001
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CAGCAGAGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QCA_001 not in the Motif Atlas
- Geometric match to HL_7RQB_001
- Geometric discrepancy: 0.1656
- The information below is about HL_7RQB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_99167.2
- Basepair signature
- cWW-F-F-cSH-F-F
- Number of instances in this motif group
- 6
Unit IDs
7QCA|1|L50|C|47
7QCA|1|L50|A|48
7QCA|1|L50|G|49
7QCA|1|L50|C|50
7QCA|1|L50|A|51
7QCA|1|L50|G|52
7QCA|1|L50|A|53
7QCA|1|L50|G|54
7QCA|1|L50|A|55
7QCA|1|L50|G|56
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LHH
- Ribosomal L29 protein
- Chain LJJ
- eL37 LJJ
- Chain LLL
- 60S ribosomal protein L39
- Chain LX0
- 60S ribosomal protein L23a
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