HL_7QCA_004
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- UAAGCAUA
- Length
- 8 nucleotides
- Bulged bases
- 7QCA|1|L50|A|132
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QCA_004 not in the Motif Atlas
- Homologous match to HL_5TBW_001
- Geometric discrepancy: 0.0933
- The information below is about HL_5TBW_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36430.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
7QCA|1|L50|U|130
7QCA|1|L50|A|131
7QCA|1|L50|A|132
7QCA|1|L50|G|133
7QCA|1|L50|C|134
7QCA|1|L50|A|135
7QCA|1|L50|U|136
7QCA|1|L50|A|137
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LAA
- uL15 LAA
- Chain LL0
- 60S ribosomal protein L13
- Chain LN0
- Ribosomal protein L15
- Chain LOO
- 60S ribosomal protein L44
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