HL_7QCA_066
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- GGCGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_7QCA_066 not in the Motif Atlas
- Homologous match to HL_5TBW_186
- Geometric discrepancy: 0.0937
- The information below is about HL_5TBW_186
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
7QCA|1|L70|G|86
7QCA|1|L70|G|87
7QCA|1|L70|C|88
7QCA|1|L70|G|89
7QCA|1|L70|A|90
7QCA|1|L70|C|91
Current chains
- Chain L70
- RNA 5S
Nearby chains
- Chain L50
- Large subunit ribosomal RNA; LSU rRNA
- Chain LF0
- 60S ribosomal protein L7
- Chain LI0
- S60 ribosomal protein L10
- Chain LS0
- 60S ribosomal protein L20
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