HL_7QG8_015

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

CGGUGAAAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_015 not in the Motif Atlas

Homologous match to HL_5J7L_015

Geometric discrepancy: 0.0746

The information below is about HL_5J7L_015

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75293.5

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

11

Unit IDs

7QG8|1|0|C|689
7QG8|1|0|G|690
7QG8|1|0|G|691
7QG8|1|0|U|692
7QG8|1|0|G|693
7QG8|1|0|A|694
7QG8|1|0|A|695
7QG8|1|0|A|696
7QG8|1|0|U|697
7QG8|1|0|G|698

Current chains

Chain 0

16S rRNA

Nearby chains

Chain 6

30S ribosomal protein S7

Chain D

30S ribosomal protein S11

Chain v

30S ribosomal protein S21