HL_7QG8_022

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

UUCAGAGAUGA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_022 not in the Motif Atlas

Geometric match to HL_5TBW_226

Geometric discrepancy: 0.3971

The information below is about HL_5TBW_226

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_59342.2

Basepair signature

cWW-F-F-F-F-cWW-F-F

Number of instances in this motif group

5

Unit IDs

7QG8|1|0|U|1009
7QG8|1|0|U|1010
7QG8|1|0|C|1011
7QG8|1|0|A|1012
7QG8|1|0|G|1013
7QG8|1|0|A|1014
7QG8|1|0|G|1015
7QG8|1|0|A|1016
7QG8|1|0|U|1017
7QG8|1|0|G|1018
7QG8|1|0|A|1019

Current chains

Chain 0

16S rRNA

Nearby chains

Chain G

30S ribosomal protein S14

Chain t

30S ribosomal protein S19