HL_7QG8_047

3D structure

PDB id

7QG8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the collided E. coli disome - VemP-stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.97 Å

Loop

Sequence

CUGGAAAG

Length

8 nucleotides

Bulged bases

7QG8|1|N|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_7QG8_047 not in the Motif Atlas

Homologous match to HL_7A0S_010

Geometric discrepancy: 0.1067

The information below is about HL_7A0S_010

Detailed Annotation

T-loop with 1 bulged base

Broad Annotation

T-loop

Motif group

HL_01609.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

18

Unit IDs

7QG8|1|N|C|305
7QG8|1|N|U|306
7QG8|1|N|G|307
7QG8|1|N|G|308
7QG8|1|N|A|309
7QG8|1|N|A|310
7QG8|1|N|A|311
7QG8|1|N|G|312

Current chains

Chain N

23S rRNA

Nearby chains

Chain h

50S ribosomal protein L24